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24) Unix one-liner to split one-line sequences into FASTA formatted files

23) Simple perl script to generate a header line for each sequence in a fasta file

22) Perl version of AVANA: BENANA!!!!!

21) LAPIS: Extracting all hit sequences from BLAST results (for hits with one or more lines of sbjct sequence)

20) Plotting Entropy Plot of MSA

19) Calculating Entropy of MSA by variable windowsize

18) Doing maths in Unix

17) Basic shell command to delimit protein/DNA sequence

16) Basic shell command to count number of fields in a file

15) Perl script to randomly shuffle sequences in a fasta file

14) Perl script for separating a fasta file into individual sequence fasta files

13) Perl script for splitting a fasta file into several small files

12) UNIX Shell Script - Converting blast2seq results into FASTA

11) Script converting BLAST output to FASTA format

10) Script converting ACII files from DOS to UNIX format

9) UNIX Shell Script - automating the benbo script for more than one input file

8) Perl Script for converting matched amino acid residues to dots

7) UNIX Shell Script for converting matched amino acid residues to dots

6) Process hit sequences in BLAST output files into FASTA formatted sequences

5) LAPIS: Extracting all sbjct sequences of a particular length from BLAST results

4) LAPIS: Extracting all hit sequences from BLAST results (for hits with only one line of sbjct sequence)

3) UNIX Shell Script for HIV Standalone Blast

2) UNIX Shell Script for WNV Netblast

1) UNIX Shell Script for Mass Alignments using Muscle

0) Understanding Unix Environment